Development of a PCR Assay for Diagnosing Trematode (Opisthorchis and Haplorchis) Infections in Human Stools

Pheophet Lamaningao Department of Public Health, Kansai Medical University, Osaka, Japan.
Regenerative Research Center for Intractable Diseases, Kansai Medical University, Osaka, Japan.

Search for other papers by Pheophet Lamaningao in
Current site
Google Scholar
PubMed
Close
,
Seiji Kanda Department of Public Health, Kansai Medical University, Osaka, Japan.
Regenerative Research Center for Intractable Diseases, Kansai Medical University, Osaka, Japan.

Search for other papers by Seiji Kanda in
Current site
Google Scholar
PubMed
Close
,
Sakhone Laimanivong Center of Malariology, Parasitology, and Entomology, Ministry of Health, Vientiane, Lao People's Democratic Republic.

Search for other papers by Sakhone Laimanivong in
Current site
Google Scholar
PubMed
Close
,
Takaki Shimono Department of Public Health, Kansai Medical University, Osaka, Japan.
Regenerative Research Center for Intractable Diseases, Kansai Medical University, Osaka, Japan.

Search for other papers by Takaki Shimono in
Current site
Google Scholar
PubMed
Close
,
Andrew Waleluma Darcy Department of Public Health, Kansai Medical University, Osaka, Japan.

Search for other papers by Andrew Waleluma Darcy in
Current site
Google Scholar
PubMed
Close
,
Amphay Phyaluanglath Clinical Laboratory, Mahosot Hospital, Ministry of Health, Vientiane, Lao People's Democratic Republic.

Search for other papers by Amphay Phyaluanglath in
Current site
Google Scholar
PubMed
Close
,
Nobuyuki Mishima Department of Public Health, Kansai Medical University, Osaka, Japan.

Search for other papers by Nobuyuki Mishima in
Current site
Google Scholar
PubMed
Close
, and
Toshimasa Nishiyama Department of Public Health, Kansai Medical University, Osaka, Japan.

Search for other papers by Toshimasa Nishiyama in
Current site
Google Scholar
PubMed
Close
Restricted access

We developed a combined conventional polymerase chain reaction (PCR) and real-time PCR (qPCR)-based assay for detecting and discriminating between Opisthorchis viverrini and Haplorchis taichui parasite infections. The first PCR amplifies the mitochondrial cytochrome c oxidase subunit I (COI) genes of parasites, and differential diagnosis is achieved by performing qPCR with specific primers and SYBR Green I. The detection limit of the assay was found to be 2.0 × 102 plasmid copies in a test in which a stool sample was spiked with a single egg, which is equivalent to 5 eggs per gram (EPG). The testing of 34 clinical stool samples that had been demonstrated to contain “Opisthorchis-like” eggs by microscopy showed that the novel assay exhibited a sensitivity of 100% for “Opisthorchis-like” parasitic infections, and 71% and 91% of these samples were found to be infected with O. viverrini and H. taichui, respectively. A further four parasitic infections were diagnosed in the 16 negative samples, and the microscopic findings of these samples were confirmed to be false negatives by sequencing analysis. The assay also displayed high specificity during the testing of 10 samples containing other common parasites. The fact that our qPCR SYBR Green I–based assay detected submicroscopic traces of parasitic DNA and was able to differentiate between parasites that produce eggs with similar morphologies indicates that it has a good potential for development of diagnostic application to use in areas where multiple parasites coexist.

Author Notes

* Address correspondence to Seiji Kanda, 2-5-1, Shinmachi, Hirakata, Osaka, Japan, 573-1010. E-mail: kandas@hirakata.kmu.ac.jp

Authors' addresses: Pheophet Lamaningao, Seiji Kanda, and Takaki Shimono, Department of Public Health, Kansai Medical University, Osaka, Japan, E-mails: lamaninp@hirakata.kmu.ac.jp, kandas@hirakata.kmu.ac.jp, and shimonot@hirakata.kmu.ac.jp. Sakhone Laimanivong, Center of Malariology, Parasitology, and Entomology, Ministry of Health, Vientiane, Lao PDR, E-mail: sakhone07@gmail.com. Andrew Waleluma Darcy, Nobuyuki Mishima, and Toshimasa Nishiyama, Department of Public Health, Kansai Medical University, Osaka, Japan, E-mails: darcyan@hirakata.kmu.ac.jp, mishiman@hirakata.kmu.ac.jp, and tnishi@hirakata.kmu.ac.jp. Amphay Phyaluanglath, Clinical Laboratory, Mahosot Hospital, Ministry of Health, Vientiane, Lao PDR, E-mail: amphay-phyaluanglath@hotmail.com.

  • 1.

    Sripa B, Kaewkes S, Sithithaworn P, Mairiang E, Laha T, Smout M, Pairojkul C, Bhudhisawasdi V, Tesana S, Thinkamrop B, Bethony JM, Loukas A, Brindley PJ, 2007. Liver fluke induces cholangiocarcinoma. PLoS Med 4: e201.

    • Search Google Scholar
    • Export Citation
  • 2.

    Belizario VY Jr, de Leon WU, Bersabe MJ, Purnomo, Baird JK, Bangs MJ, 2004. A focus of human infection by Haplorchis taichui (Trematoda: Heterophyidae) in the southern Philippines. J Parasitol 90: 11651169.

    • Search Google Scholar
    • Export Citation
  • 3.

    Chai JY, Sohn WM, Jung BK, Yong TS, Eom KS, Min DY, Insisiengmay B, Insisiengmay S, Phommasack B, Rim HJ, 2015. Intestinal helminths recovered from humans in Xieng Khouang Province, Lao PDR with a particular note on Haplorchis pumilio infection. Korean J Parasitol 53: 439445.

    • Search Google Scholar
    • Export Citation
  • 4.

    Sayasone S, Vonghajack Y, Vanmany M, Rasphone O, Tesana S, Utzinger J, Akkhavong K, Odermatt P, 2009. Diversity of human intestinal helminthiasis in Lao PDR. Trans R Soc Trop Med Hyg 103: 247254.

    • Search Google Scholar
    • Export Citation
  • 5.

    Chai JY, Han ET, Guk SM, Shin EH, Sohn WM, Yong TS, Eom KS, Lee KH, Jeong HG, Ryang YS, Hoang EH, Phommasack B, Insisiengmay B, Lee SH, Rim HJ, 2007. High prevalence of liver and intestinal fluke infections among residents of Savannakhet Province in Laos. Korean J Parasitol 45: 213218.

    • Search Google Scholar
    • Export Citation
  • 6.

    Chai JY, Han ET, Shin EH, Sohn WM, Yong TS, Eom KS, Min DY, Um JY, Park MS, Hoang EH, Phommasack B, Insisiengmay B, Lee SH, Rim HJ, 2009. High prevalence of Haplorchis taichui, Phaneropsolus molenkampi, and other helminth infections among people in Khammouane province, Lao PDR. Korean J Parasitol 47: 243247.

    • Search Google Scholar
    • Export Citation
  • 7.

    Chai JY, Yong TS, Eom KS, Min DY, Shin EH, Banouvong V, Insisiengmay B, Insisiengmay S, Phommasack B, Rim HJ, 2010. Prevalence of the intestinal flukes Haplorchis taichui and H. yokogawai in a mountainous area of Phongsaly Province, Lao PDR. Korean J Parasitol 48: 339342.

    • Search Google Scholar
    • Export Citation
  • 8.

    Sato M, Thaenkham U, Dekumyoy P, Waikagul J, 2009. Discrimination of O. viverrini, C. sinensis, H. pumilio and H. taichui using nuclear DNA-based PCR targeting ribosomal DNA ITS regions. Acta Trop 109: 8183.

    • Search Google Scholar
    • Export Citation
  • 9.

    Duenngai K, Sithithaworn P, Rudrappa UK, Iddya K, Laha T, Stensvold CR, Strandgaard H, Johansen MV, 2008. Improvement of PCR for detection of Opisthorchis viverrini DNA in human stool samples. J Clin Microbiol 46: 366368.

    • Search Google Scholar
    • Export Citation
  • 10.

    Stensvold CR, Saijuntha W, Sithithaworn P, Wongratanacheewin S, Strandgaard H, Ornbjerg N, Johansen MV, 2006. Evaluation of PCR based coprodiagnosis of human opisthorchiasis. Acta Trop 97: 2630.

    • Search Google Scholar
    • Export Citation
  • 11.

    Wongratanacheewin S, Pumidonming W, Sermswan RW, Pipitgool V, Maleewong W, 2002. Detection of Opisthorchis viverrini in human stool specimens by PCR. J Clin Microbiol 40: 38793880.

    • Search Google Scholar
    • Export Citation
  • 12.

    Muller B, Schmidt J, Mehlhorn H, 2007. PCR diagnosis of infections with different species of Opisthorchiidae using a rapid clean-up procedure for stool samples and specific primers. Parasitol Res 100: 905909.

    • Search Google Scholar
    • Export Citation
  • 13.

    Thaenkham U, Blair D, Nawa Y, Waikagul J, 2012. Families Opisthorchiidae and Heterophyidae: are they distinct? Parasitol Int 61: 9093.

  • 14.

    Thaenkham U, Visetsuk K, Dung do T, Waikagul J, 2007. Discrimination of Opisthorchis viverrini from Haplorchis taichui using COI sequence marker. Acta Trop 103: 2632.

    • Search Google Scholar
    • Export Citation
  • 15.

    Lovis L, Mak TK, Phongluxa K, Soukhathammavong P, Sayasone S, Akkhavong K, Odermatt P, Keiser J, Felger I, 2009. PCR Diagnosis of Opisthorchis viverrini and Haplorchis taichui infections in a Lao Community in an area of endemicity and comparison of diagnostic methods for parasitological field surveys. J Clin Microbiol 47: 15171523.

    • Search Google Scholar
    • Export Citation
  • 16.

    Arimatsu Y, Kaewkes S, Laha T, Hong SJ, Sripa B, 2012. Rapid detection of Opisthorchis viverrini copro-DNA using loop-mediated isothermal amplification (LAMP). Parasitol Int 61: 178182.

    • Search Google Scholar
    • Export Citation
  • 17.

    Kaewkong W, Intapan PM, Sanpool O, Janwan P, Thanchomnang T, Laummaunwai P, Lulitanond V, Doanh PN, Maleewong W, 2013. Molecular differentiation of Opisthorchis viverrini and Clonorchis sinensis eggs by multiplex real-time PCR with high resolution melting analysis. Korean J Parasitol 51: 689694.

    • Search Google Scholar
    • Export Citation
  • 18.

    Sanpool O, Intapan PM, Thanchomnang T, Janwan P, Lulitanond V, Doanh PN, Van Hien H, Dung do T, Maleewong W, Nawa Y, 2012. Rapid detection and differentiation of Clonorchis sinensis and Opisthorchis viverrini eggs in human fecal samples using a duplex real-time fluorescence resonance energy transfer PCR and melting curve analysis. Parasitol Res 111: 8996.

    • Search Google Scholar
    • Export Citation
  • 19.

    Le TH, Van De N, Blair D, Sithithaworn P, McManus DP, 2006. Clonorchis sinensis and Opisthorchis viverrini: development of a mitochondrial-based multiplex PCR for their identification and discrimination. Exp Parasitol 112: 109114.

    • Search Google Scholar
    • Export Citation
  • 20.

    Wittwer CT, Herrmann MG, Moss AA, Rasmussen RP, 1997. Continuous fluorescence monitoring of rapid cycle DNA amplification. Biotechniques 22: 130131, 134–138.

    • Search Google Scholar
    • Export Citation
  • 21.

    Ririe KM, Rasmussen RP, Wittwer CT, 1997. Product differentiation by analysis of DNA melting curves during the polymerase chain reaction. Anal Biochem 245: 154160.

    • Search Google Scholar
    • Export Citation
  • 22.

    Nicolas L, Milon G, Prina E, 2002. Rapid differentiation of Old World Leishmania species by LightCycler polymerase chain reaction and melting curve analysis. J Microbiol Methods 51: 295299.

    • Search Google Scholar
    • Export Citation
  • 23.

    Pietila J, He Q, Oksi J, Viljanen MK, 2000. Rapid differentiation of Borrelia garinii from Borrelia afzelii and Borrelia burgdorferi sensu stricto by LightCycler fluorescence melting curve analysis of a PCR product of the recA gene. J Clin Microbiol 38: 27562759.

    • Search Google Scholar
    • Export Citation
  • 24.

    Papin JF, Vahrson W, Dittmer DP, 2004. SYBR green-based real-time quantitative PCR assay for detection of West Nile Virus circumvents false-negative results due to strain variability. J Clin Microbiol 42: 15111518.

    • Search Google Scholar
    • Export Citation
  • 25.

    Eom KS, Yong TS, Sohn WM, Chai JY, Min DY, Rim HJ, Jeon HK, Banouvong V, Insisiengmay B, Phommasack B, 2014. Prevalence of helminthic infections among inhabitants of Lao PDR. Korean J Parasitol 52: 5156.

    • Search Google Scholar
    • Export Citation
  • 26.

    Saijuntha W, Sithithaworn P, Wongkham S, Laha T, Chilton NB, Petney TN, Barton M, Andrews RH, 2008. Mitochondrial DNA sequence variation among geographical isolates of Opisthorchis viverrini in Thailand and Lao PDR, and phylogenetic relationships with other trematodes. Parasitology 135: 14791486.

    • Search Google Scholar
    • Export Citation
  • 27.

    Ando K, Sithithaworn P, Nuchjungreed C, Tesana S, Srisawangwong T, Limviroj W, Chinzei Y, 2001. Nucleotide sequence of mitochondrial CO I and ribosomal ITS II genes of Opisthorchis viverrini in northeast Thailand. Southeast Asian J Trop Med Public Health 32 (Suppl 2): 1722.

    • Search Google Scholar
    • Export Citation
  • 28.

    Wilde J, Eiden J, Yolken R, 1990. Removal of inhibitory substances from human fecal specimens for detection of group A rotaviruses by reverse transcriptase and polymerase chain reactions. J Clin Microbiol 28: 13001307.

    • Search Google Scholar
    • Export Citation
  • 29.

    Abu Al-Soud W, Radstrom P, 2000. Effects of amplification facilitators on diagnostic PCR in the presence of blood, feces, and meat. J Clin Microbiol 38: 44634470.

    • Search Google Scholar
    • Export Citation
  • 30.

    Shepard GC, Lawson HL, Hawkins GA, Owen J, 2011. BsaXI/RFLP analysis of initial or selectively reamplified PCR product is unreliable in detecting the V617F mutation in JAK2. Int J Lab Hematol 33: 267271.

    • Search Google Scholar
    • Export Citation
  • 31.

    Cai XQ, Yu HQ, Li R, Yue QY, Liu GH, Bai JS, Deng Y, Qiu DY, Zhu XQ, 2014. Rapid detection and differentiation of Clonorchis sinensis and Opisthorchis viverrini using real-time PCR and high resolution melting analysis. ScientificWorldJournal 2014: 893981.

    • Search Google Scholar
    • Export Citation
  • 32.

    Umesha KR, Kumar S, Parvathi A, Duenngai K, Sithithaworn P, Karunasagar I, 2008. Opisthorchis viverrini: detection by polymerase chain reaction (PCR) in human stool samples. Exp Parasitol 120: 353356.

    • Search Google Scholar
    • Export Citation
  • 33.

    Giboda M, Ditrich O, Scholz T, Viengsay T, Bouaphanh S, 1991. Human Opisthorchis and Haplorchis infections in Laos. Trans R Soc Trop Med Hyg 85: 538540.

    • Search Google Scholar
    • Export Citation
  • 34.

    Chai JY, Yong TS, Eom KS, Min DY, Jeon HK, Kim TY, Jung BK, Sisabath L, Insisiengmay B, Phommasack B, Rim HJ, 2013. Hyperendemicity of Haplorchis taichui infection among Riparian people in Saravane and Champasak province, Lao PDR. Korean J Parasitol 51: 305311.

    • Search Google Scholar
    • Export Citation
  • 35.

    Sripa B, Bethony JM, Sithithaworn P, Kaewkes S, Mairiang E, Loukas A, Mulvenna J, Laha T, Hotez PJ, Brindley PJ, 2011. Opisthorchiasis and Opisthorchis-associated cholangiocarcinoma in Thailand and Laos. Acta Trop 120 (Suppl 1): S158S168.

    • Search Google Scholar
    • Export Citation
Past two years Past Year Past 30 Days
Abstract Views 56 56 14
Full Text Views 364 111 1
PDF Downloads 167 42 0
 
Membership Banner
 
 
 
Affiliate Membership Banner
 
 
Research for Health Information Banner
 
 
CLOCKSS
 
 
 
Society Publishers Coalition Banner
Save