Estimation of Plasmodium falciparum Transmission Intensity in Lilongwe, Malawi, by Microscopy, Rapid Diagnostic Testing, and Nucleic Acid Detection

Jonathan B. Parr Division of Infectious Diseases, University of North Carolina, Chapel Hill, North Carolina.

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Connor Belson Department of Biology, University of North Carolina, Chapel Hill, North Carolina.

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Jaymin C. Patel Department of Epidemiology, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, North Carolina.

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Irving F. Hoffman Division of Infectious Diseases, University of North Carolina, Chapel Hill, North Carolina.
University of North Carolina Project-Malawi, Lilongwe, Malawi.

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Portia Kamthunzi University of North Carolina Project-Malawi, Lilongwe, Malawi.

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Francis Martinson University of North Carolina Project-Malawi, Lilongwe, Malawi.

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Gerald Tegha University of North Carolina Project-Malawi, Lilongwe, Malawi.

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Isaac Thengolose University of North Carolina Project-Malawi, Lilongwe, Malawi.

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Chris Drakeley London School of Hygiene and Tropical Medicine, London, United Kingdom.

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Steven R. Meshnick Department of Epidemiology, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, North Carolina.

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Veronica Escamillia Department of Obstetrics and Gynecology, University of Chicago, Chicago, Illinois.

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Michael Emch Department of Geography, University of North Carolina, Chapel Hill, North Carolina.

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Jonathan J. Juliano Division of Infectious Diseases, University of North Carolina, Chapel Hill, North Carolina.
Department of Epidemiology, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, North Carolina.
Curriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, North Carolina.

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Estimates of malaria transmission intensity (MTI) typically rely upon microscopy or rapid diagnostic testing (RDT). However, these methods are less sensitive than nucleic acid amplification techniques and may underestimate parasite prevalence. We compared microscopy, RDT, and polymerase chain reaction (PCR) for the diagnosis of Plasmodium falciparum parasitemia as part of an MTI study of 800 children and adults conducted in Lilongwe, Malawi. PCR detected more cases of parasitemia than microscopy or RDT. Age less than 5 years predicted parasitemia detected by PCR alone (adjusted odds ratio = 1.61, 95% confidence interval = 1.09–2.38, Wald P = 0.02). In addition, we identified one P. falciparum parasite with a false-negative RDT result due to a suspected deletion of the histidine-rich protein 2 (hrp2) gene and used a novel, ultrasensitive PCR assay to detect low-level parasitemia missed by traditional PCR. Molecular methods should be considered for use in future transmission studies as a supplement to RDT or microscopy.

Author Notes

* Address correspondence to Jonathan J. Juliano, Division of Infectious Diseases, University of North Carolina, CB#7030, 130 Mason Farm Road, Chapel Hill, NC 27599. E-mail: jjuliano@med.unc.edu

Financial support: This work was supported by the National Institutes of Allergy and Infectious Diseases (5T32AI007151 to Jonathan B. Parr, 5 T32AI07001–36 to Veronica Escamillia, and R01AI089819 to Jonathan J. Juliano), the UNC Summer Undergraduate Research Gold Fellowship for Connor Belson, a GlaxoSmithKline post-graduate fellowship to Veronica Escamillia, the Population Research Infrastructure Program through funding awarded by the Eunice Kennedy Shriver National Institute of Child Health and Human Development to the Carolina Population Center [R24 HD050924 to Veronica Escamillia], and the National Science Foundation [BCS-1339949 to Michael Emch]. The MTI study was sponsored by GlaxoSmithKline and funded by GlaxoSmithKline and PATH MVI.

Authors' addresses: Jonathan B. Parr and Irving F. Hoffman, Division of Infectious Diseases, University of North Carolina, Chapel Hill, NC, E-mails: jonathan_parr@med.unc.edu and irving_hoffman@med.unc.edu. Connor Belson, Department of Biology, University of North Carolina, Chapel Hill, NC, E-mail: connorbelson@gmail.com. Jaymin C. Patel and Steven R. Meshnick, Department of Epidemiology, Gillings School of Global Public Health, Chapel Hill, NC, E-mails: jaymin86@email.unc.edu and meshnick@email.unc.edu. Portia Kamthunzi, Francis Martinson, Gerald Tegha, and Isaac Thengolose, University of North Carolina Project-Malawi, Lilongwe, Malawi, E-mails: portia@globemw.net, fmartinson@unclilongwe.org, gtegha@unclilongwe.org, and ithengolose@unclilongwe.org. Chris Drakeley, Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, United Kingdom, E-mail: chris.drakeley@lshtm.ac.uk. Veronica Escamilla, Center for Infectious Diseases, University of North Carolina, Chapel Hill, NC, and Carolina Population Center, University of North Carolina, Chapel Hill, NC, E-mail: escamill@email.unc.edu. Michael Emch, Department of Geography, University of North Carolina, Chapel Hill, NC, E-mail: emch@med.unc.edu. Jonathan J. Juliano, Division of Infectious Diseases, Department of Medicine, University of North Carolina, Chapel Hill, NC, E-mail: jonathan_juliano@med.unc.edu.

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