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| ABSTRACT |
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| INTRODUCTION |
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Glycerol-3-phosphate dehydrogenase (GPDH: NAD+ 2 oxidorreductase, EC 1.1.1.8) is a soluble cytosolic NAD-dependent enzyme present in all eukaryotic organisms.9 It plays a central role in the intermediate metabolism of insects10 and in the
-glycerophosphate cycle in thoracic flight muscles. The enzyme is usually present in several isozymic forms that show different properties and specific tissue and developmental distribution. The enzyme is a dimer of two identical subunits.11 The GPDH enzyme has been most extensively characterized in Drosophila melanogaster in which different isozymes (GPDH-1, GPDH-2, and GPDH-3) are encoded by a single gene (5.9 kb) with eight exons and a single transcription start point.12 Three different mRNAs are generated by alternative splicing of the 3'-end (exons 6, 7, and 8) of the primary transcript.13 The two major isozymes GPDH-1 and GPDH-3 exhibit a differential tissue distribution in adults14 and a different temporal expression throughout development.15 Each isozyme performs a distinct metabolic function: GPDH-1 is involved in the flight muscle metabolism and GPDH-3 provides precursors for lipid biosynthesis in the gonads, fat bodies, and abdomen in larvae and nymphs.12,16
It was demonstrated that GPDH involved in the glycerophosphate shuttle increases its activity 30-fold in adult thoracic muscles.17 Adult muscles should have higher glycolytic and respiratory capacity to support fly activity. Electrophoretic studies showed two isoforms of GPDH in T. infestans. The predominant isoform in nymph thoracic muscles and gonads has less mobility than the isoform in adult thoracic muscles. We have characterized GPDH isozymes from T. infestans and investigated their expression in adult tissues and during flight muscles development.
| MATERIALS AND METHODS |
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Isolation of total RNA. Total RNAs were isolated from pools of insect tissues using TRizol reagent (Invitrogen, Carlsbad, CA) following the manufacturers protocol. Samples used were T. infestans adult and fifth instar nymph thoracic muscles, adult gonads, and fat bodies; A. mellifera adults thoracic muscles; and D. melanogaster whole bodies. Extracts were diluted 1:100 with nuclease-free water (0.1% diethylpyrocarbonate) and RNA concentration determined by absorption at 260 nm.
Degenerated primer selection, retrotranscription, PCR, and cloning. First-strand cDNA synthesis was performed with 1 µL of Oligo-dT20 (50 µM) (Invitrogen), 3 µg of total RNA from three-day-old adult T. infestans, and 300 U of SuperScript III-RT (Invitrogen) in a 20-µL reaction volume that was incubated at 55°C for 1 hour. For subsequent PCR, 1 µL of first-strand cDNA (template), 4 µM of each degenerate primer, 0.2 µM of each specific primer, 0.5 U of Taq Platinum DNA polymerase (Invitrogen), 0.2 mM dNTPs, 1.5 mM MgCl2, and 2.5 µL of 10x PCR buffer minus M (Invitrogen) were added to a 25-µL reaction volume. Degenerate oligonucleotide primers for PCR were derived from the conserved region of the sequence of GPDH from the flying insects D. melanogaster (gi|16197915|gb|AAL13721.1), A. mellifera (gi|3064138|gb|AAC14552.1), Locusta migratoria (gi|4163991|gb|AAD05300.1), Anopheles gambiae (gi|55245320|gb|EAA03917.3), and Aedes aegypti (gi|108883109|gb|EAT47334.1). The cDNA product was amplified by conventional PCR using degenerate primers F4: 5'-TTGYGARACNACNATYGGYYGC-3' and R2: 5'-ATNACNGCNGCYTTNGTRTT-3', and corresponding specific primers for A. mellifera F5: 5'-TGTGAAACTACTATTGGTTGC-3' and R3: 5'-ATTACTGCAGCTTTTGTATT-3' and D. melanogaster F6: 5'-TGCGAAACGACAATCGGCTGC-3' and R4: 5'-ATGACAGCCGCCTTGGTGTT-3'. The PCR was performed with a Thermocycler (Mycycler; Bio-Rad, Hercules, CA) with an initial denaturation at 94°C for 5 minutes, followed by 35 cycles at 94°C for 30 seconds, 50°C for 1 minute, and 72°C for 1.5 minute, and finally an incubation at 72°C for 7 minutes. Amplification was confirmed and fragment sizes was estimated by electrophoresis of 10 µL of the PCR product on a 10-cm 1.5% agarose gel (Tris-acetate EDTA buffer, pH 8) containing 0.5 µg/mL of ethidium bromide.
The PCR products with a 200-bp predicted size were obtained for T. infestans and positive control samples A. mellifera and D. melanogaster. The T. infestans PCR product was purified from the agarose gel using the QIAEX II kit (Invitrogen) and was cloned into pCR4-TOPO TA cloning vector (Invitrogen) following the manufacturers instructions. Analysis of the sequence was performed for several clones using the BLASTβeta program19 and comparing it with the SWISSPROT20,21 database. The T. infestans fragment was shown to be part of the GPDH gene and cDNA.
RACE-PCR. Four gene-specific primers were designed based on the T. infestans sequence. Two primers had the same sequence as the coding strand: FGSP: 5'-GCGAGACCACAATCGGCTGCGTAGA-3' and FNGSP: 5'-GTTGTCCAGGACGTTAA CACCGTAGA-3', and two others were complementary to the coding strand: RGSP: 5- ' TGAAACCAGCTGCTGTTGCCACA-3' and RNGSP: 5'-CTACGGTGTTAACGTCCTGGACAACTTT-3'. The RACE procedures were conducted using a commercial kit (Invitrogen). Primers were designed based on the partial sequences of T. infestans GPDH cDNA fragment.
For amplification of 5' ends of GPDH isoforms, 5 'g total RNA were treated with calf intestine phosphatase to remove 5' phosphates and eliminate truncated mRNA and non-mRNA. Dephosphorylated RNAs were treated with tobacco acid pyrophosphatase to remove the 5' cap structure from intact, full-length mRNA. Using T4 RNA ligase, the RNA oligonucleotide was ligated to the 5' region of the RNAs. The GeneRacer RNA oligonucleotide provides a known priming site. Reverse transcription was conducted using the RGSP primer and Superscript III RT. To amplify the first-strand cDNA and to obtain the 5' end, GSRP and the GeneRacer 5' Primer (homologous to the GeneRacer RNA oligo) were used. It was necessary to perform nested PCR with RNGP and Gene Racer 5' nested primer. The resulting cDNA fragment was cloned into the pCR4-TOPO TA cloning vector and DNAs of several clones obtained by this procedure were purified and sequenced.
For the amplification of 3' end, 5 µg of total RNA were reverse transcribed with Gene Racer Oligo dT and Superscript III-RT. To amplify the first-strand cDNA and to obtain the 3' cDNA encoding for GPDH isozymes, an FGSP and a GeneRacer 3' primer (homologous to GeneRacer Oligo dT Primer) were used. Only mRNA with a poly A tail was reverse transcribed and amplified using PCR. It was necessary to perform additional PCR with nested primers FNGSP and GeneRacer 3' nested primer. The resulting products were cloned into the pCR4-TOPO TA cloning vector and DNAs of clones obtained were purified and sequenced.
Sequencing. The resulting products of the RT-PCR with degenerate oligonucleotide primers and RACE-PCR were cloned into the pCR4-TOPO TA cloning vector, and DNAs of 20 clones from each experiment obtained by this procedure were purified and sequenced by the ATGen Molecular System (Faculty of Sciences, Montevideo, Uruguay) using primers M13 forward and M13.
Sequence analysis and homology modeling. Sequence analysis was carried out with the DNA SeqEq version 1.03 program (Applied Biosystems, Darstadt, Germany). The GenBank database was searched using the BLAST utility program.20 Analysis of the T. infestans GPDH isozymes sequences was performed using the BLAST-x. version 2.1.14 program19 and comparing it with the SWISSPROT21 database. To calculate its identity with other GPDHs, complete sequences were obtained from the SWISSPROT21 database available at the NBCI website (http://www.ncbi.nlm.nih.gov/). Multiple sequence alignment was carried out using CLUSTALW version 3.2. The deduced protein was analyzed using ExPASy Proteomics Tools (http://www.expasy.org/tools/).
The amino acid sequence of Homo sapiens GPDH-1 (gi|99031624|pdb|1X0V|A[99031624]) was obtained from Swiss Prot protein sequence database21 (http://www.expansy.ch/sprot). A homology model was generated using the Swiss-Model Repository (http://swissmodel.expasy-.org/repository/) and an automated protein modeling server (GlaxoSmithKline, Research Triangle Park, NC).22,23
Expression of GPDH isozymes. Isolation of total RNA from tissue pools and first-strand cDNA synthesis was performed and subjected to RT-PCR analysis. Subsequent PCRs used 1 µL of first-strand cDNA as template, 0.2 µM of each specific primer and β-actin primers as positive controls, 0.5 U of Taq Platinum DNA polymerase (Invitrogen), 0.2 mM dNTPs, 1.5 mM MgCl2, and 2.5 µL of 10x PCR Buffer minus M (Invitrogen) in a 25-µL reaction. The PCR was performed using a thermocycler (Mycycler; Bio-Rad) with a initial denaturation at 94°C for 5 minutes, followed by 35 cycles 94°C for 30 seconds, 60°C for 40 seconds, 72°C for 1.0 minutes, and a final incubation at 72°C for 7 minutes. Specific primers for GPDH were F: 5'-GCTGGTTTCATTGATGGCTTAGG-3' and different reverse primer corresponding to GPDH-1 Rm: 5'-TTCTTCACTGGGTGTTCTC-3' and GPDH-2 Rg: 5'-GTCCAGCAGTTAACCCCCGTAGA-3'. The β-actin–specific primers AF1: 5'-AAGGGGCTACTCTTTCACA-3', AF2: 5'-ATTGCCCCACGCCATCCTT-3', AR1: 5'-CCATCAGGCAATTCATAGGA-3', and AR2: 5'-AGCGGTAGCCATTTCCTCTTCA-3' were designed based on a sequenced 300-bp PCR product amplified with the β-actin universal primer pair. The RT-PCR products (10 µL) were separated by electrophoresis on a 10-cm 1.5% agarose gel (Tris-acetate EDTA buffer, pH 8) containing 0.5 µg/mL of ethidium bromide. Digital images were obtained under ultraviolet illumination with a Chemi Doc System (Bio-Rad). Semi-quantification of PCR bands was performed with the ImageJ program24 through a graphical method that measures peak areas.
| RESULTS |
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RACE analysis of T. infestans GPDH transcripts. We carried out the RACE investigation using RNA extracted from adult T. infestans thoracic muscles and gonads. We amplified full-length cDNAs sequences of the GPDH using gene specific primers. It was necessary to perform nested PCR to obtain visible product bands.
Sequence analysis, conserved domains, and homology modeling.
The RACE 3' and 5' products were obtained from thoracic muscles and gonads. Full-length cDNA fragments encode polypeptides with amino acid sequences similar to GPDH found in other flying insects. Figure 1
shows the complete cDNA sequences and the inferred amino acid sequences for T. infestans GPDH isozymes. The cDNA from adult muscles contained 1,253 nucleotides with an open reading frame (ORF) of 1,065 (EU139315) nucleotides that encoded 355 amino acids. The cDNA sequence includes the start codon ATG and the stop codon TAA. Adult gonad cDNAs contained 1,262 nucleotides with an ORF of 1,074 (EU139316) nucleotides that encoded 358 amino acids. These sequences have the start codon ATG and the stop codon TAA. The amino acid sequences of GPDHs that are inferred from the nucleotide sequence were aligned with those of four of the same enzymes from H. sapiens GPDH-1(gi|99031624|pdb|1X0V|A[99031624]), T. infestans EU139315-isoform 1, A. mellifera gi|3064138|gb|AAC14552.1|, D. melanogaster gi|295746|emb|CAA32381.1|, and L. migratoria gi|4163995|gb|AAD05302.1|isoform 3b. The nucleotide sequences of coding regions showed 61%, 65%, 67%, and 64% identity, respectively, and the amino acid sequences showed 73%, 80%, 81%, and 81% identity, respectively.
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helices. All β sheets are flanked by two
helices structures. The first
β unit contains the highly conserved GxGxxG NAD+-binding motif. The catalytic domain, which extends from residue 196 to residue 336 for H. sapiens GPDH-1, is organized into several
helices whose number varies with the species. Figure 2
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Expression of GPDH isozymes.
GPDH-1 and GPDH-2 exhibit a unique temporal and tissue-specific pattern of expression in T. infestans. The RT-PCR with specific primers for isozymes was carried out. The positive control was a fragment of β-actin with two pairs of specific primers for T. infestans (AF1-AR1 and AF2-AR2). Figure 3
shows that the GPDH-1 transcript is predominant in pools from both sexes of 1–5-day-old adult thoracic muscles, and the GPDH-2 transcript is present in pools of both sexes of fifth instar nymph thoracic muscles, adult gonads, and fat bodies. Both transcripts are present in 30-day-old adult thoracic muscles. Figure 4
shows that the pattern of expression during flight muscle development shows differences between sexes. Semi-quantification in Figure 5
shows that GPDH-1 transcript is expressed later in males and GPDH-2 is highly expressed in female after the last molt to adults. These results are consistent with the metabolic role described for GPDH isozymes in flying insects.
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| DISCUSSION |
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The GPDH locus in D. melanogaster13 and other insects expresses three classes of transcripts corresponding to GPDH-1, GPDH-2 and GPDH-3 by alternative splicing. In A. mellifera, loss of introns that are present in D. melanogaster or mouse genes gives rise to only one GPDH transcript.27 Whether the isoforms are coded by the same locus and expressed by alternative splicing or by different loci and gene organization to express two mature transcripts in T. infestans remains to be elucidated.
The NAD+-binding domain shows especially high conservation throughout the NAD+-binding motifs28 G10, G12, and G15 and binding residues S16, E38M, K120, and Q298. The amino acid substitutions observed do not substantially alter the predicted positions of the
and β-elements in the model predicted for T. infestans deduced amino acid sequence.
The catalytic domain is less conserved, and the region of the protein linking the NAD+-binding site with the catalytic domain seems particularly divergent. Overall, the amino acid replacements observed in domains do not suggest any substantial alterations to the secondary structure assignments on the basis of predictions.
The GPDH isoforms are not distributed equally in space or time. Expression is related to insect tissue or development stage; it tends to favor lipid accumulation in gonads, fat bodies, and larva or nymph thoracic muscles (GPDH-2 and GPDH-3) or to provide NAD+ for flight muscles (GPDH-1). The glycolytic enzymes hexokinase and fructose-6-phosphate dehydrogenase increase their activities in T. infestans adult thoracic muscles.17 A 30-fold increase in GPDH activity in adult flight muscles was also described for Triatomine insects17 and can be related to a metabolic adaptation to support flight requirements. Adult muscles should have higher glycolytic and respiratory activity and probably have higher levels of GPDH-1 expression and activity to transfer reducing equivalents to mitochondria for ATP synthesis. Modification of the activity of an enzyme during development can be brought about through several mechanisms. These include changes in the concentration of messenger RNA for that enzyme, varying rates of transcription or mRNA processing, or mRNA degradation. The level of enzyme activity may also fluctuate because of changes in translation rates or changes in rates of enzyme degradation. Enzyme activity may be controlled by altering the catalytic efficiency of a given number of enzymes. In T. infestans, the increment may be produced by GPDH-1 expression.
GPDH-2 is the predominant isoform in T. infestans gonads, fat bodies, and nymph thoracic muscles. The presence of GPDH-2 is probably related to the synthesis of triacylglycerols, which requires production of glycerol-3-phosphate from dihydroxyacetone phosphate. It was demonstrated that flight initiation probability in T. infestans is higher in females than in males.29 Accordingly, expression of GDPH-1 begins earlier in females and expression of GPDH-2 is higher in adult thoracic muscles from females than in those from males. It is known that insects use lipids as fuel for flight and reproduction. Electron microscope observations of T. infestans thoracic muscles showed large inclusions of partially extracted lipids.17 In addition, fatty acid binding proteins partially characterized from Dipetalogaster maximus (Triatomine) flight muscles showed high identity (approximately 71% in N-terminal residues) with other flying insects.30 The different 3' ends of GPDH isoforms inferred for C-terminal amino acid sequences ETPSEE for GPDH-1 and FFTKKSLKP for GPDH-2 could condition the enzymatic activity and the sub-cellular localization needed to accomplish their metabolic role.
Chagas disease is recognized as the most serious human parasitic disease of Latin America in terms of its social and economic impact.1 Because of their biology and close association with humans, T. infestans is one of the most important vectors of Trypanosoma cruzi.3 There is no vaccine or effective treatment for infection with T. cruzi. Studies on enzymes involved in flight and reproduction of the vector may contribute to understand the basic processes that give T. infestans the capacity to invade new habitats and colonize human dwellings. This knowledge of the properties of vector enzymes could provide new data for designing control campaigns.
Received November 23, 2007. Accepted for publication April 1, 2008.
Acknowledgments: We thank Antonio Blanco for helpful suggestions and critical revision of the manuscript, and the Insectary of the Reference Center of Vectors, National Service of Chagas, Córdoba, Argentina, for providing insects used in our studies.
Financial support: This study was supported in part by grants from the Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET, Argentina) and Secretaría de Ciencia y Tecnología (SECYT) de la Universidad Nacional de Córdoba, Argentina. Néstor Soria, Rodolfo Pereira is a Career Member of CONICET and Mara í Mercedes Stroppa is a fellow of CONICET.
* Address correspondence to María Mercedes Stroppa, Departamento de Bioquímica y Biología Molecular, Facultad de Medicina, Pabellón Argentina, 2 do Piso, Ciudad Universitaria, Córdoba, CP 5000, Argentina. E-mail: mercedesstroppa{at}hotmail.com ![]()
Authors addresses: María Mercedes Stroppa, Carlota Carriazo, Néstor Soria, Rodolfo Pereira, and Nelia M. Gerez de Burgos, Departamento de Bioquímica y Biologìa Molecular, Facultad de Ciencias Médicas, Pabellón Argentina, 2 do Piso, Ciudad Universitaria, Córdoba, CP 5000, Argentina, Tel: 54-351-433-3024, Fax: 54-351-4333072, E-mail: mercedesstroppa{at}hotmail.com.
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-glycerophosphate dehydrogenase from Drosophila melanogaster. Biochim Biophys Acta 429: 316.
-glycerol-3-phosphate dehydrogenase isozymes are generated by alternate pathways of RNA processing resulting in different carboxyl-terminal amino acid sequence. J Biol Chem 263: 10858–10864.
-glycerophosphate dehydrogenase: distribution and change in activity during development. J Insect Physiol 16: 1179–1192.[Web of Science][Medline]
-glycerophosphate dehydrogenase isozymes in Drosophila melanogaster. Biochem Genet 3: 343–353.[Web of Science][Medline]
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