Am. J. Trop. Med. Hyg., 77(1), 2007, pp. 102-106
Copyright © 2007 by The American Society of Tropical Medicine and Hygiene
Comparison of Trypanosoma cruzi Lineages and Levels of Parasitic DNA in Infected Mothers and Their Newborns
Myrna Virreira,
Carine Truyens,
Cristina Alonso-Vega,
Laurent Brutus,
Juan Jijena,
Faustino Torrico,
Yves Carlier, AND
Michal Svoboda*
Laboratoire de Chimie Biologique, Faculté de Médecine, Université Libre de Bruxelles (U.L.B.), Brussels, Belgium; Laboratoire de Parasitologie, Faculté de Médecine, Université Libre de Bruxelles (U.L.B.), Brussels, Belgium; Facultad de Medicina, Universidad Mayor de San Simon (U.M.S.S.), Cochabamba, Bolivia; Institut de Recherche pour le Développement (IRD, France), Mother and Child Health Research Unit (UR010), La Paz, Bolivia; Unidad de Neonatologia, Hospital Universitario "San Juan de Dios," Tarija, Bolivia
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ABSTRACT
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To better understand the factors involved in maternalfetal transmission of Trypanosoma cruzi, we compared DNA levelsobtained by use of quantitative real-time PCR and parasitic genotypes determined by PCR amplification followed by hybridizationin Bolivian mothers and their congenitally infected newborns. Mothers and their neonates displayed markedly different parasitic DNA levels, as most maternal estimated parasitemias (> 90%) were < 10 parasites/mL, whereas those of 76% of their newborns were > 1,000 parasites/mL. Comparison of T. cruzi TcII sublineages infecting mothers and newborns showed identity, without evidence of mixed infection in mothers or neonates. Analysis of minor variants of TcIId-genotyped parasites using sequence class probes hybridizing with hypervariable domains of kDNA minicircles showed discrepancies in half of mother/newborn pairs.
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INTRODUCTION
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The protozoan parasite Trypanosoma cruzi, agent of Chagas disease, infects 1618 million people in Latin America. Parasites are mainly transmitted by blood-sucking vector bugs releasing excreta containing infectious agents, transfusion of infected blood, or congenitally from mothers to their fetuses.1 In endemic countries where national programs of vectorial control and selection of blood donors have been developed, maternalfetal transmission of parasites has evolved as the most important route of T. cruzi infection, making possible transmission from one generation to another.2,3
Such transmission occurs in 112% of infected mothers, and morbidity and mortality of congenital infection vary from asymptomatic to severe and mortal clinical forms of disease.3,4 Host as well as parasitic factors might be involved in such variations. Indeed, recent studies have highlighted associations between a higher frequency of positive hemocultures in infected mothers and their lower capacity to develop a parasite-specific immune response and congenital infection.5 We have also recently shown that neonates could be infected with T. cruzi of various nDNA genotypes, such as TcIIb, TcIId, and TcIIe sublineages, and with kDNA variants of the TcIId sublineage, independently of their parasitemia or clinical status, indicating that the DNA polymorphism of T. cruzi, at least of type TcIId, was not associated with the clinical diversity of congenital infection.6
To better understand the factors involved in the maternalfetal transmission of T. cruzi, the present work aims to compare the sublineages of T. cruzi, as well as their DNA levels, using quantitative real-time PCR (qPCR), in blood of infected mothers and their infected neonates.
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MATERIAL AND METHODS
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Patients and blood samples.
The present work considered 36 newborns congenitally infected with T. cruzi and 15 of their mothers (from whom samples were available), coming from the Bolivian regions of Cochabamba (Maternity German Urquidi, University Hospital Viedma, "Universidad Mayor de San Simon") and Tarija (Maternity Hospital "San Juan de Dios" and the district hospital of Yacuiba). Clinical data of such patients have been reported elsewhere.4,6 Umbilical cord and maternal venous blood samples were immediately mixed with the same volume of guanidine-HCl 6 M, EDTA 0.1 M (pH 8), boiled for 15 min, and kept at 4°C until use. This study has been approved by the scientific/ethic committees of U.M.S.S. and Université Libre de Bruxelles (U.L.B.), and written informed consent was obtained from the mothers before blood collection.
Diagnosis of T. cruzi infection.
Maternal infection was assessed using standard T. cruzi-specific serological tests (ELISA, hemagglutination, and immunofluorescence) performed as previously described.4 Congenital infection with T. cruzi was assessed by direct microscopic detection of parasites in blood buffy coat collected in 46 centrifuged microhematocrit heparinized tubes (n = 35) or by hemoculture (n = 1) as previously described.4 The detection limit of such parasitological detection was estimated to be 40 parasites/mL.7 The number of positive microhematocrit tubes containing parasites, as well as the number of detected parasites per tube allowed estimation of parasitemia as either low (
40 to < 150 p/mL), medium (
150 to < 400 p/mL), or high (
400 p/mL).
DNA extraction and standard PCR.
DNA was isolated from 0.2 mL of blood/guanidine solution, using the QIAamp DNA Blood Mini Kit (Qiagen, Valencia, CA), according to the manufacturers protocol. Purified DNA was dissolved in 200 µL of 10 mM Tris-HCl, 1 mM EDTA, pH 8.0, and conserved at 20°C until use. Presence of T. cruzi DNA in extract was first tested by standard PCR using primers amplifying either nDNA (Tcz1/Tcz2, giving amplicons of 200 pb) or kinetoplast sequences (Tc121/Tc122, giving amplicons of 320 pb).8
T. cruzi typing.
Identification of (sub)lineages of T. cruzi and of variants of the sublineage TcIId was performed by hybridization of DNA amplicons resulting from the Tc121/Tc122 PCR amplification, with oligonucleotides or kDNA probes as previously described.6 The TcIId variants were grouped according to their relative hybridization pattern with probes Oli-IId-1 and Oli-IId-2 as described by Virreira and others in 2006.6 Although our TcIIe probe hybridizes also to some extent with the TcIIb lineage, samples hybridizing with the TcIIe probe but not with the TcIIb probe are unambiguously typed as the TcIIe sublineage.
Quantitative real-time PCR (qPCR).
Assays of qPCR were performed using the SYBR Green system (Roche Applied Science, Mannheim, Germany) in a LightCycler 2.0 System (Roche), according to the manufacturers instructions and using kDNA S35/S36 modified primers as previously described.9 However, the hybridization temperature of the amplification program was increased from 57°C (as described by Cummings and Tarleton in 20039) to 63 or 65°C, to delay the appearance of unspecific bands (background) originating from human DNA.10 All samples were analyzed in duplicate, in at least two separate experiments. Under standard conditions, the reaction medium (10 µL final volume) was prepared in glass capillaries mixing 2 µL of LightCycler FastStart DNA Master SYBR Green I buffer containing Taq polymerase, 0.8 µL of 25 mM µL of each 10 µM MgCl2, 0.5 S35/S36 modified primers, 5.2 µL of sterile water, and 1 µL of template DNA. Standard curves were performed using 10-fold serial dilutions of an initial suspension of 105 parasites (trypomastigote form) in 1 mL of a mixture containing 0.5 mL of human blood and 0.5 mL of 6 M guanidine-HCl, 0.1 M EDTA, pH 8, and boiled for 10 minutes. The reaction mix was centrifuged in a Roche LightCycler Carousel Centrifuge 2.0 before amplification with the following program: denaturation phase of 95°C for 15 minutes and 40 cycles of 95°C for 10 sec, 63°C for 10 sec, and 72°C for 5 sec.
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RESULTS
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Evaluation of qPCR in detecting T. cruzi DNA levels in blood samples.
Reproducible agreement between the number of cycles of qPCR and the number of parasites per assay was obtained using the serial dilutions of parasites in human blood. Figure 1A
shows values of a standard curve performed at a hybridization temperature of 63°C, allowing reliable detection down to 0.00110 parasites DNA equivalent/assay, corresponding to 220,000 parasites/mL of blood. Unspecific background amplification, obtained with various negative blood samples, resulted in a crossing point of 27 cycles or more (dashed area in Figure 1A
). The crossing point of the lowest concentration tested (0.001 parasite/assay) was
1 cycle less than the crossing point of negative controls. By increasing the hybridization temperature to 65°C, the crossing point of the cycle number corresponding to the background was increased to 30 cycles, and the lowest concentration tested resulted in a crossing point
2 cycles less than the crossing point of negative controls. Consequently, this last condition (hybridization temperature of 65°C) allowed better appreciation of very low parasitemia.

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FIGURE 1. Amplification of T. cruzi DNA extracted from human blood. (A) Standard curve of qPCR using the SYBR Green system (Roche) in the LightCycler apparatus performed at a hybridization temperature of 63°C with blood artificially infected with known amounts of parasites. A background of unspecific amplification of various negative samples was observed at > 27 cycles (dashed area). (B) Amplification curves of DNA extracted from various blood samples. Fluorescence was recorded after each cycle. CM stands for "mothers"; CB stands for "baby." (C) Classic PCR of DNA extracted from the same samples as in (B), using the GoTaq polymerase kit (Promega, Madison, WI). Amplicons were separated on TAE 1.2% agarose gel in the presence of ethidium bromide (0.50 µg/mL).
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Fluorescence intensities of amplicons obtained after standard PCR (performed using both nDNA Tcz1-Tcz2 and kDNA Tc121/122 primers) and the qPCR in blood samples of infected individuals were compared. Figure 1, B and C
, shows good agreement between fluorescence intensities of amplicons in standard PCR and qPCR.
Determination of T. cruzi DNA blood levels in congenitally infected newborns and their mothers.
The 36 studied umbilical cord blood samples of congenital cases were positive in the standard Tcz1-Tcz2 PCR.8 Determination of parasitic DNA levels by qPCR indicated parasitemias ranging between 6 and 55,600 parasites/mL in these samples. Figure 2
shows the distribution of such parasitic load, indicating that 76.3% of these blood samples contained > 1,000 parasites/mL. As shown in Figure 3
, agreement was observed between the qPCR data and the semiquantitative estimation of parasitemia performed by microscopic analysis of capillary tubes. Three umbilical cord blood samples of these confirmed congenital cases harbored a qPCR-estimated parasitemia of < 40 parasites/mL: 2 were detected positive by direct microscopic examination, and the third was positive after hemoculture but negative by microscopic examination.

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FIGURE 2. Distribution of parasitemias estimated from DNA levels in umbilical cord blood. DNA of 36 samples of umbilical blood of congenitally infected babies was extracted and amplified by qPCR (see Materials and Methods).
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FIGURE 3. Agreement between parasitemias in umbilical cord of T. cruzi congenitally infected newborns as estimated by qPCR and microscopic examination of centrifuged capillary tubes. Results are expressed in geometric means ± SEM; n = number of samples.
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The standard Tcz1-Tcz2 PCR was positive in all 15 of the available blood samples from mothers of congenitally infected newborns. Quantitative PCR performed in these samples showed parasitic DNA levels much lower than those of their infected newborns, corresponding to 212 parasites/mL. Fourteen of the 15 mothers (93.3%) displayed parasitemias < 10 parasites/mL. There was correlation neither between maternal and neonatal qPCR-estimated parasitemias nor between T. cruzi-specific antibody maternal levels and estimated maternal or neonatal parasitemias (P > 0.05).
T. cruzi typing in infected mothers and newborns.
Data of T. cruzi typing of the 36 studied umbilical cord blood samples of congenital cases were reported previously.6 Briefly, 34 samples were infected with the TcIId sublineage (94.4%), whereas 2 other samples harbored the sublineages TcIIb and TcIIe. Fifteen mothers of the above-mentioned neonates showed 14 (93.3%) and 1 (6.7%) infected with the TcIId and TcIIe sublineages, respectively. Mixed infections with different T. cruzi sublineages were detected neither in mothers nor in fetuses. Comparison of such T. cruzi typing in the 15 mother/neonate pairs showed the parasitic sublineages being identical in all mothers and their newborns (14 pairs infected with TcIId and 1 pair infected with TcIIe).
The complementary kDNA genotyping of the 14 mother/neonate pairs harboring the TcIId sublineage showed 7 mother/neonate pairs displaying an identical pattern of hybridization with both oligonucleotide Oli-TcIId-1 and Oli-TcIId-2 probes, indicating the presence of similar TcIId variants in both samples (Figure 4A
). The 7 other mother/neonate pairs displayed markedly different relative patterns of hybridization with the Oli-TcIId-1 and Oli-TcIId-2 probes, indicating that these mothers and their neonates were infected with different TcIId variants (Figure 4B
).

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FIGURE 4. Relative hybridization with oligonucleotides probes of amplicons isolated from maternal and umbilical cord blood. (A) Samples presenting identical patterns of relative hybridization with oligonucleotides Oli-IId-1 and Oli-IId-2. (B) Samples presenting different patterns of relative hybridization with oligonucleotides Oli-IId-1 and Oli-IId-2.
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DISCUSSION
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Altogether, our results show that 1) mothers display low parasitic DNA levels, corresponding to parasitemia < 10 parasites/mL in 90% of them, whereas their newborns displayed high DNA levels corresponding to parasitemia levels > 1,000 parasites/mL in more than 76% of them; 2) comparison of T. cruzi sublineages infecting mothers and their newborns (TcIId and TcIIe) showed identity without evidence of mixed infection in mothers or in neonates; 3) comparison of minor variants of TcIId showed discrepancies in half of mother/newborn pairs.
Our data emphasize the capacity of qPCR to estimate T. cruzi DNA levels directly from human blood, as was also the case in amniotic fluid, as previously shown.10 In our experimental conditions, the limit of detection of qPCR could be estimated to 2 parasites/mL of blood using a hybridization temperature of 65°C (i.e., a detection limit similar to that of the standard Tcz1-Tcz2 PCR that we used for qualitative appreciation of the presence of parasitic DNA).8 By contrast, the microscopic examination of parasites concentrated in capillary tubes allows to detect parasitemia
40 parasites/mL.7
Although the parasite detection threshold of PCR techniques is low, it is important to note that such procedures detect parasitic DNA without giving information on parasite viability, whereas the above-mentioned parasitological method indicates unambiguously the presence of live parasites. Indeed, PCR detection of low levels of parasitic DNA could correspond to debris of dead parasites not yet degraded by host blood DNase, without current infection. In addition, kDNA of Trypanosomatidae is organized in multiple circles, probably much more difficult to digest than linear nDNA. These considerations might complicate the diagnosis by PCR of congenital infection in newborns, as we may not exclude that parasitic DNA might be transferred from the mother to the fetus without the passage of live parasites (i.e., in the absence of infection), as is likely the case for other parasitic molecules.11 This has to be kept in mind when interpreting qPCR results that show low levels of foreign DNA in blood, and the existence of infection must be confirmed by other data or other PCR analysis of blood.12 However, qPCR remains a sophisticated and expensive technique useful as an investigation tool to improve our understanding of the maternalfetal transmission of T. cruzi but is hardly applicable in the control strategies for congenital Chagas disease.2,3
Agreement between parasite levels obtained by qPCR and parasite counts in capillary tubes highlights the reliability of detecting parasitic DNA levels to estimate parasitemia. The high parasitemia observed in > 76% of congenitally infected neonates confirms the intense parasite multiplication occurring in fetal tissues in this particular form of acute chagasic infection. However, some neonates also displayed lower parasitemia. Such differences could relate to the timing of the first transplacental transmission of parasites during gestation, a weaker neonatal parasitism, or the closer to delivery such transmission might have occurred. Another non-exclusive possibility lies in the capacity of fetuses/neonates to control infection. Indeed, it has been previously shown that T. cruzi-infected fetuses/neonates were able to overcome their physiologic immunologic immaturity by developing a cytotoxic-and IFN-
producing CD8 T-cell response toward parasites.13 Both factors (timing of maternalfetal parasite transmission and fetal capacity to develop its own immune response) likely contribute to explain the absence of a correlation between maternal and neonatal estimated parasitemia.
Parasitic DNA levels detected in infected mothers were close to the lower detection limit of qPCR. However, such low parasitic DNA levels can be considered as corresponding to living parasites (see above) because high levels of T. cruzi-specific antibodies were detected in such mothers: half of them displayed T. cruzi-positive hemocultures,5 and they have transmitted parasites to their fetuses. These low maternal parasitemias, contrasting with the 100-fold higher parasite blood levels observed in most neonates, likely relates to the stronger T. cruzi-specific immune response developed by such chronically infected mothers than in their fetuses/neonates.5,13
The T. cruzi typing of blood samples of congenital cases and of some mothers confirmed previous data that we and others obtained, indicating the sublineage TcIId as largely distributed in the Bolivian population6,14 and that various (sub)lineages of T. cruzi can be involved in congenital chagasic infection.6 A remarkable result of the present study comes from the comparison of T. cruzi genotypes infecting the mothers and their neonates, which shows similar (sub)lineages (TcIId, TcIIe) in all mother/neonate pairs, whereas different minor kDNA variants of the TcIId sublineage were found in half of such pairs. The observation of parasite genotypes similar in both mothers and newborns is the expected result in case of maternal infection with only 1 parasite genotype directly transmitted to the fetus. Discrepancies between the T. cruzi genotypes observed in mothers and their newborns, as observed for minor TcIId kDNA variants, can be differently interpreted. One hypothesis relates to maternal infection with only 1 parasite genotype that is transmitted to the fetus. A much more intense parasite multiplication occurring in the infected fetuses in comparison to mothers would allow susceptible mutations to rapidly generate new variants detected in the neonates, although contradictory data have been reported about the mutation rates in the hypervariable regions in kDNA minicircles.15,16 Another possible interpretation of such discrepancies relates to possible mixed maternal infections with various TcIId variants (which cannot be excluded using our protocol), followed by either a transplacental passage of only one of these variants to be transmitted to the fetus or by a transplacental transmission of various variants and a more rapid multiplication of one of these variants becoming dominant in fetus. Interestingly, previous histopathologic studies of placentas performed by our team indicated that parasite multiplication occurred in the chorionic plate and the membranal chorion (i.e., within regular cells for T. cruzi multiplication), without invasion of trophoblastic villi3,17 (and unpublished data), suggesting that the capacity of placenta to select the parasite genotype during maternalfetal transmission is probably limited.
In conclusion, comparison of parasitic features in infected mothers and their newborns highlights the contrasting levels of high parasitemia observed in neonates and the low parasitemia detected in their mothers. Mixed infections by various sublineages were detected neither in mothers nor in neonates, and these sublineages of T. cruzi were found to be identical in mothers and their neonates. However, further studies will be necessary to clarify the mechanism leading to the detection of different minor T. cruzi variants in mothers and their neonates using probes hybridizing with hypervariable domains of kDNA minicircles.
Received February 21, 2007.
Accepted for publication April 18, 2007.
Acknowledgments: The authors thank Dolores Rangel and Nelly Aguado (Hospital Universitario San Juan de Dios and Laboratorio de EpidemiologiaSEDES, Tarija, Bolivia). M. Virreira is a recipient of a "Xénophilia" grant (ULB, Belgium). C. Alonso-Vega is fellow of the "Association pour la Promotion de lÉducation et la Formation à lÉtranger" (APEFE, "Communauté Française de Belgique").
Financial support: This study was supported by the Conseil Interuniversitaire de la Communauté Française de Belgique (CIUF) and the Fonds National de la Recherche Scientifique Médicale (Belgium, conventions 3.4.595.99/3.4.615.05).
* Address correspondence to Michal Svoboda, Laboratoire de Chimie Biologique, Faculté de Médecine, U.L.B., 808 Route de Lennik CP 611, B-1070 Bruxelles, Belgium. E-mail: msvobod{at}ulb.ac.be 
Authors addresses: Myrna Virreira and Michal Svoboda, Laboratoire de Chimie Biologique, Faculté de Médecine, Université Libre de Bruxelles (U.L.B.), Brussels, Belgium, Telephone: +32 2 555 62 25, Fax: +32 2 555 62 30, E-mail: msvobod{at}ulb.ac.be. Carine Truyens and Yves Carlier, Laboratoire de Parasitologie, Faculté de Médecine, Université Libre de Bruxelles (U.L.B.), Brussels, Belgium. Cristina Alonso-Vega and Faustino Torrico, Facultad de Medicina, Universidad Mayor de San Simon (U.M.S.S.), Cochabamba, Bolivia. Laurent Brutus, Institut de Recherche pour le Développement (IRD, France), Mother and Child Health Research Unit (UR010), La Paz, Bolivia. Juan Jijena, Unidad de Neonatologia, Hospital Universitario "San Juan de Dios," Tarija, Bolivia.
Reprint requests: Michal Svoboda, Laboratoire de Chimie Biologique, Faculté de Médecine, U.L.B., 808 Route de Lennik CP 611, B-1070 Bruxelles, Belgium. E-mail: msvobod{at}ulb.ac.be.
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